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Species belonging to selected taxon:

Drosophila virilis



ABOUT THIS RECORD

ID: MNEST037390
species: Drosophila virilis
miRNA family: mir-310
source: miRBase, original name: dvi-mir-310 (MI0009500)

Taxonomy by NCBI:
Drosophila virilis virilis group Drosophila Drosophila Drosophiliti Drosophilina Drosophilini Drosophilinae Drosophilidae Ephydroidea Acalyptratae Schizophora Cyclorrhapha Eremoneura Muscomorpha Brachycera Diptera Endopterygota Neoptera Pterygota Dicondylia Insecta Hexapoda Pancrustacea Mandibulata Arthropoda Panarthropoda Protostomia Coelomata Bilateria Eumetazoa Metazoa Fungi/Metazoa group Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TATTGCACATCTCCCGGCCTAT

miRNA*
AGGCCGTGCTCTGTGTGAATATG

mismatches: 5
bulges: 1

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pre-miRNA
ATCATTTTTAGGCCGTGCTCTGTGTGAATATGTTTTTAACTATAATCATATTGCACATCTCCCGGCCTATAAGTGT

dot-bracket secondary structure
..(((((.(((((((.(...(((((.((((((.((........)).)))))))))))...).))))))).))))).


SIMILARITIES
miRBase dan-mir-310: 0.0000002

PMRD no hits

microPC no hits
UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
additional data
download this record

references

[1] Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie, Nature. 450:203-218(2007)., "Evolution of genes and genomes on the Drosophila phylogeny"




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